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Numerical modeling of the cerebral arterial and venous blood-vessel system in macro- and mesoscale based on 3D MRI data

2013/08/M/ST7/00943

Keywords:

magnetic resonance angiography artifacts of TOF/SWI sequences 3D image processing and segmentation quantitative image analysis robustness to artifacts fusion of statistical and geometrical models physical and numerical phantoms validation of models and algorithms blood-flow simulation

Descriptors:

  • ST6_12: Scientific computing, simulation and modelling tools
  • ST7_3: Simulation engineering and modelling
  • ST7_11: Electronic, optoelectronic and photonic components and systems for applications (e.g. in biomedical engineering)

Panel:

ST7 - Systems and communication engineering: electronics, communication, optoelectronics

Host institution :

Politechnika Łódzka, Wydział Elektrotechniki, Elektroniki, Informatyki i Automatyki

woj. łódzkie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Andrzej Materka 

Number of co-investigators in the project: 10

Call: HARMONIA 4 - announced on 2012-12-15

Amount awarded: 801 060 PLN

Project start date (Y-m-d): 2013-09-03

Project end date (Y-m-d): 2017-03-02

Project duration:: 42 months (the same as in the proposal)

Project status: Project settled

Information in the final report

  • Publication in academic press/journals (4)
  • Articles in post-conference publications (14)
  1. Numerical Modeling of MR Angiography for Quantitative Validation of Image-Driven Assessment of Carotid Stenosis
    Authors:
    Artur Klepaczko, Andrzej Materka, Piotr Szczypiński, Michał Strzelecki
    Academic press:
    IEEE Transactions on Nuclear Science (rok: 2015, tom: Vol. 62(3), strony: 619-627), Wydawca: Institute of Electrical and Electronics Engineers
    Status:
    Published
    DOI:
    10.1109/TNS.2015.2433925 - link to the publication
  2. 3D vascular tree segmentation using a multiscale vesselness function and a level set approach
    Authors:
    Tomasz Woźniak, Michał Strzelecki, Agata Majos, Ludomir Stefańczyk
    Academic press:
    Biocybernetics and Biomedical Engineering (rok: 2017, tom: 37, strony: 66-77), Wydawca: Elsevier
    Status:
    Published
    DOI:
    brak - link to the publication
  3. Computer Simulation of Magnetic Resonance Angiography Imaging: Model Description and Validation
    Authors:
    Artur Klepaczko, Piotr Szczypiński, Grzegorz Dwojakowski, Michał Strzelecki, Andrzej Materka
    Academic press:
    PloS One (rok: 2014, tom: 9(4):e93689, strony: 45306), Wydawca: Public Library of Science
    Status:
    Published
    DOI:
    10.1371/journal.pone.0093689 - link to the publication
  4. Simulation of MR angiography imaging for validation of cerebral arteries segmentation algorithms
    Authors:
    Artur Klepaczko, Piotr M. Szczypiński, Andreas Deistung, Jürgen R. Reichenbach, Andrzej Materka
    Academic press:
    Computer Methods and Programs in Biomedicine (rok: 2016, tom: 137, strony: 293-309), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.cmpb.2016.09.020 - link to the publication
  1. A centerline-based algorithm for estimation of blood vessels radii from 3D raster images
    Authors:
    Jacek Blumenfeld, Marek Kociński, Andrzej Materka
    Conference:
    Signal Processing, Algorithms, Arrangements and Applications (SPA) (rok: 2015, ), Wydawca: IEEE
    Data:
    konferencja 23-25 September
    Status:
    Published
  2. A stereoscopic viewer of the results of vessel segmentation in 3D magnetic resonance angiography images
    Authors:
    Krzysztof Karolczak, Artur Klepaczko
    Conference:
    IEEE Signal Processing Algorithms, Architectures, Arrangements, and Applications - SPA 2014 (rok: 2014, ), Wydawca: Poznań University of Technology
    Data:
    konferencja 22-24 September
    Status:
    Published
  3. Tubular-Shaped Numerical Test Objects for Validation of 3D Blood-Vessel Image Segmentation Algorithms
    Authors:
    Marek Kociński, Andrzej Materka, Michał Strzelecki
    Conference:
    The 2014 Joint National PhD Conference in Medical Imaging and MedViz Conference (rok: 2014, ), Wydawca: University of Bergen
    Data:
    konferencja 17-18 June
    Status:
    Published
  4. Automated centerline-based modeling of tubular blood vessel segments from 3D MRA
    Authors:
    Marek Kociński, Jacek Blumenfeld, Andrzej Materka, Andreas Deistung, Barthelemy Serres, Juergen R. Reichenbach
    Conference:
    ESMRBM 2015 32nd Annual Scientific Meeting, vol. 28, Suppl. 1, Oct 2015 (rok: 2015, ), Wydawca: Magnetic Resonance Materials in Physics, Biology and Medicine MAGMA, Springer
    Data:
    konferencja 1-3 October
    Status:
    Published
  5. Toward consolidation of MRI-based macro and mesoscale models of cerebral vasculature
    Authors:
    Marek Kociński, Andrzej Materka, Andreas Deistung, Juergen R. Reichenbach
    Conference:
    ESMRBM 2016 33rd Annual Scientific Meeting, vol. 29, Suppl. 1, Oct 2016 (rok: 2016, ), Wydawca: Magnetic Resonance Materials in Physics, Biology and Medicine MAGMA, Springer
    Data:
    konferencja 29 September - 1 October
    Status:
    Published
  6. Towards multi-scale personalized modeling of brain vasculature based on magnetic resonance image processing
    Authors:
    Marek Kociński, Andrzej Materka, Andreas Deistung, Jürgen Reichenbach, Arvid Lundervold
    Conference:
    IEEE 24th International Conference on Systems, Signals and Image Processing (rok: 2017, ), Wydawca: Poznań University of Technology
    Data:
    konferencja May 22-24
    Status:
    Published
  7. On extracting skeletons from binary 3D images
    Authors:
    Piotr Zasiński, Marek Kociński, Andrzej Materka
    Conference:
    IEEE 24th International Conference on Systems, Signals and Image Processing (rok: 2017, ), Wydawca: Poznań University of Technology
    Data:
    konferencja May 22-24
    Status:
    Published
  8. Segmentation of 3D magnetic resonance brain vessel images based on level set approaches
    Authors:
    Tomasz Woźniak, Michał Strzelecki
    Conference:
    Signal Processing: Algorithms, Architectures, Arrangements, and Applications (SPA) (rok: 2015, ), Wydawca: IEEE
    Data:
    konferencja 23-25 September
    Status:
    Published
  9. Centerline-based surface modeling of blood-vessel trees in cerebral 3D MRA
    Authors:
    Marek Kociński, Andrzej Materka, Andreas Deistung, Juergen R. Reichenbach
    Conference:
    IEEE Signal Processing Algorithms, Architectures, Arrangements, and Applications - SPA 2016 (rok: 2016, ), Wydawca: Poznań University of Technology
    Data:
    konferencja 21-23 September
    Status:
    Published
  10. Texture parameters of DCE-derived blood pharmacokinetic maps as possible biomarkers of endometrial carcinoma grade
    Authors:
    Marek Kociński, Andrzej Materka, Arvid Lundervold, Helga Salvesen, Sigmund Ytre-Hauge, Ingfrid Haldorsen
    Conference:
    ESMRBM 2016 Congress, Book of Abstracts, Saturday (rok: 2016, ), Wydawca: European Society of Magnetic Resonance in Medicine and Biology
    Data:
    konferencja September 29 - October 1
    Status:
    Published
    DOI:
    link to the publication
  11. Automated Modeling of Tubular Blood Vessels in 3D MR Angiography Images
    Authors:
    Andrzej Materka, Marek Kociński, Jacek Blumenfeld, Andreas Deistung, Barthelemy Serres, Juergen R. Reichenbach
    Conference:
    9th International Symposium on Image and Signal Processing and Analysis (ISPA 2015) (rok: 2015, ), Wydawca: IEEE Signal Processing Society
    Data:
    konferencja September 7-9
    Status:
    Published
  12. Computer Simulation of the SWI Protocol in Nuclear Magnetic Resonance Imaging
    Authors:
    Grzegorz Izydorczyk, Artur Klepaczko
    Conference:
    Computer Vision and Graphics - International Conference, ICCVG 2014, Warsaw, Poland (rok: 2014, ), Wydawca: Lecture Notes in Computer Science 8671, Springer 2014
    Data:
    konferencja September 15-17
    Status:
    Published
    DOI:
    link to the publication
  13. On accuracy of personalized 3D-printed MRI-based models of brain arteries
    Authors:
    Marek Kociński, Andrzej Materka, Marcin Elgalal, Agata Majos
    Conference:
    IEEE 24th International Conference on Systems, Signals and Image Processing (rok: 2017, ), Wydawca: Poznań University of Technology
    Data:
    konferencja May 22-24
    Status:
    Published
  14. On sensitivity of texture parameters to smooth variations of local image intensity and contrast
    Authors:
    Michał Strzelecki, Andrzej Materka
    Conference:
    IEEE Signal Processing Algorithms, Architectures, Arrangements, and Applications - SPA 2014 (rok: 2014, ), Wydawca: Poznań University of Technology
    Data:
    konferencja 22-24 September
    Status:
    Published

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