Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Prediction of Cascade complex structure.

2012/05/N/NZ2/01652

Keywords:

macromolecular modeling Cascade bioinformatics structures modeling

Descriptors:

  • NZ1_4: Structural biology
  • NZ2_7: Bioinformatics
  • NZ2_8: Computational biology

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Uniwersytet im. Adama Mickiewicza w Poznaniu, Wydział Biologii

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Joanna Kasprzak 

Number of co-investigators in the project: 3

Call: PRELUDIUM 3 - announced on 2012-03-15

Amount awarded: 99 850 PLN

Project start date (Y-m-d): 2013-02-27

Project end date (Y-m-d): 2015-08-26

Project duration:: 30 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. brak danych.
  2. stacja robocza (3 008 PLN)

Information in the final report

  • Publication in academic press/journals (3)
  • Book publications / chapters in book publications (1)
  1. The architecture of the Schizosaccharomyces pombe CCR4-NOT complex
    Authors:
    Marta Ukleja,1,2,3,* Jorge Cuellar,3,* Aleksandra Siwaszek,1,2 Joanna M. Kasprzak,4,5 Mariusz Czarnocki-Cieciura,1,2 Janusz M. Bujnicki,4,5 Andrzej Dziembowski,a,1,2 and Jose M. Valpuestab,3
    Academic press:
    Nature Communications (rok: 2016, tom: 7, strony: 10433), Wydawca: Nature
    Status:
    Published
    DOI:
    https://www.nature.com/articles/ncomms10433 - link to the publication
  2. Structure and intrinsic disorder of the proteins of the Trypanosoma brucei editosome
    Authors:
    Czerwoniec A, Kasprzak JM, Bytner P, Dobrychlop M, Bujnicki JM
    Academic press:
    Febs Letters (rok: 2015, tom: 14;589(19 Pt A), strony: -), Wydawca: Febs
    Status:
    Published
    DOI:
    10.1016/j.febslet.2015.07.026 - link to the publication
  3. Computational modeling of protein–RNA complex structures
    Authors:
    Irina Tuszynska,Dorota Matelska, Marcin Magnus, Grzegorz Chojnowski, Joanna M. Kasprzak, Lukasz P. Kozlowski, Stanislaw Dunin-Horkawicz, Janusz M. Bujnicki
    Academic press:
    Methods (rok: 2014, tom: 65, strony: 310-319), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.ymeth.2013.09.014 - link to the publication
  1. Modeling of protein-RNA complex structures using computational docking methods
    Authors:
    Bharat Madan, Joanna Kasprzak, Irina Tuszynska, Marcin Magnus, Krzysztof Szczepaniak, Wayne Dawson, Janusz M. Bujnicki
    Book:
    Engineering and creation of ligand binding proteins (rok: 2016, tom: -, strony: -), Wydawca: Springer
    Status:
    Published

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