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Information on the principal investigator and host institution

Information of the project and the call

Keywords

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Pervasive adaptive introgression of genes evolving under balancing selection?

2012/04/A/NZ8/00662

Keywords:

adaptation balancing selection introgression immune system

Descriptors:

  • NZ8_1: Evolutionary biology
  • NZ8_9: Population genetics

Panel:

NZ8 - Evolutionary and environmental biology: evolution, ecology, population biology, biodiversity, biogeography

Host institution :

Uniwersytet Jagielloński, Wydział Biologii

woj. małopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Wiesław Babik 

Number of co-investigators in the project: 7

Call: MAESTRO 2 - announced on 2011-12-15

Amount awarded: 2 990 150 PLN

Project start date (Y-m-d): 2012-09-11

Project end date (Y-m-d): 2018-09-10

Project duration:: 72 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Zamrażarki (2 szt.) (4 000 PLN)
  2. pH-metr.
  3. Komputery dla nowozatrudnionych pracowników (4 szt.) (15 000 PLN)
  4. Wirówka z wirnikiem na płytki 96-dołkowe (20 000 PLN)
  5. Średnioprzepustowy sekwenator nowej generacji (500 000 PLN)
  6. Dodatkowy węzeł i przestrzeń dyskowa jako upgrade klastra komputerowego (120 000 PLN)
  7. Termomikser laboratoryjny (10 000 PLN)

Information in the final report

  • Publication in academic press/journals (11)
  1. Isolation and Gene Flow in a Speciation Continuum in Newts
    Authors:
    Maciej Pabijan, Piotr Zieliński, Katarzyna Dudek, Michał Stuglik, Wiesław Babik
    Academic press:
    Molecular Phylogenetics and Evolution (rok: 2017, tom: 116, strony: 45303), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.ympev.2017.08.003 - link to the publication
  2. The distributions of the six species constituting the smooth newt species complex (Lissotriton vulgaris sensu lato and L. montandoni) – an addition to the New Atlas of Amphibians and Reptiles of Europe
    Authors:
    Wielstra B., Canestrelli D., Cvijanović M., Denoël M., Fijarczyk M., Jablonski D., Liana M., Naumov B., Olgun K., Pabijan M., Pezzarossa A., Popgeorgiev G., Salvi D., Si Y., Sillero N., Sotiropoulos K., Zieliński P., Babik W.
    Academic press:
    Amphibia-Reptilia (rok: 2018, tom: 39, strony: 252-259), Wydawca: Societas Europaea Herpetologica
    Status:
    Published
    DOI:
    10.1163/15685381-17000128 - link to the publication
  3. Detecting balancing selection in genomes: Limits and prospects
    Authors:
    Fijarczyk A., Babik W.
    Academic press:
    Molecular Ecology (rok: 2015, tom: 24, strony: 3529-3545), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1111/mec.13226 - link to the publication
  4. Linkage map of Lissotriton newts provides insight into the genetic basis of reproductive isolation
    Authors:
    M. Niedzicka, K. Dudek, A. Fijarczyk, P. Zieliński, W. Babik
    Academic press:
    G3: Genes | Genomes | Genetics (rok: 2017, tom: 7, strony: 2115-2124), Wydawca: Genetics Society America
    Status:
    Published
    DOI:
    10.1534/g3.117.041178 - link to the publication
  5. Selective landscapes in newt immune genes inferred from patterns of nucleotide variation
    Authors:
    Fijarczyk A., Dudek K., Babik W.
    Academic press:
    Genome Biology and Evolution (rok: 2016, tom: 8, strony: 3417-3432), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/gbe/evw236 - link to the publication
  6. Balancing selection and introgression of newt immune-response genes
    Authors:
    Fijarczyk A. Dudek K., Niedzicka M., Babik W.
    Academic press:
    Proceedings of the Royal Society of London B: Biological Sc iences (rok: 2018, tom: 285, strony: art. 20180819), Wydawca: Royal Society
    Status:
    Published
    DOI:
    10.1098/rspb.2018.0819 - link to the publication
  7. Constraint and Adaptation in newt Toll-Like Receptor Genes
    Authors:
    Babik W., Dudek K., Fijarczyk A., Pabijan M., Stuglik M., Szkotak R., Zieliński P.
    Academic press:
    Genome Biology and Evolution (rok: 2015, tom: 7, strony: 81-95), Wydawca: OUP
    Status:
    Published
    DOI:
    10.1093/gbe/evu266 - link to the publication
  8. The crested newt Triturus cristatus recolonized temperate Eurasia from an extra-Mediterranean glacial refugium
    Authors:
    Wielstra B., Babik W., Arntzen, J.W.
    Academic press:
    Biological Journal of the Linnean Society (rok: 2015, tom: 114, strony: 574-587), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1111/bij.12446 - link to the publication
  9. Development, validation and high-throughput analysis of sequence markers in nonmodel species
    Authors:
    Zieliński P., Stuglik M.T., Dudek K., Konczal M., Babik W.
    Academic press:
    Molecular Ecology Resources (rok: 2014, tom: 14, strony: 352-360), Wydawca: John Wiley & Sons Ltd
    Status:
    Published
    DOI:
    10.1111/1755-0998.12171 - link to the publication
  10. Molecular Inversion Probes for targeted resequencing in non-model organisms
    Authors:
    M. Niedzicka, A. Fijarczyk, K. Dudek, M. Stuglik, W. Babik
    Academic press:
    Scientific Reports (rok: 2016, tom: 6, strony: art. 24051: 1-9), Wydawca: Nature Publishing Group
    Status:
    Published
    DOI:
    10.1038/srep24051 - link to the publication
  11. The dissection of a Pleistocene refugium: phylogeography of the smooth newt, Lissotriton vulgaris, in the Balkans
    Authors:
    Pabijan M., Zieliński P., Dudek K., Chloupek M., Sotiropoulos K., Liana M., Babik W.
    Academic press:
    Journal of Biogeography (rok: 2015, tom: 42, strony: 671-683), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1111/jbi.12449 - link to the publication

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