Projects funded by the NCN
Genomewide extracellular signal-regulated kinase (ERK) pathway components interaction with human genome
2011/01/D/NZ2/05307
Keywords:
chromatin immunoprecipitation MAPK pathway next-generation sequencing histone modifications cis-regulatory sequences
Descriptors:
- NZ2_2: Genomics, transcriptomics, epigenomics
Panel:
NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology
Host institution :
Centrum Onkologii - Instytut im. Marii Skłodowskiej-Curie
woj. mazowieckie
Principal investigator (from the host institution):
Number of co-investigators in the project: 3
Call: SONATA 1 - announced on 2011-03-15
Amount awarded: 697 680 PLN
Project start date (Y-m-d): 2011-12-06
Project end date (Y-m-d): 2014-12-05
Project duration:: 36 months (the same as in the proposal)
Project status: Project settled
Information in the final report
- Publication in academic press/journals (2)
- Genome-wide co-localization of active EGFR and downstream ERK pathway kinases mirrors mitogen-inducible RNA polymerase 2 genomic occupancyAuthors:Mikula, Michal; Skrzypczak, Magdalena; Goryca, Krzysztof; Paczkowska, Katarzyna; Ledwon, Joanna; Statkiewicz, Malgorzata; Kulecka, Maria; Grzelak, Marta; Dabrowska, Michalina; Kuklinska, Urszula; Karczmarski, Jakub; Rumienczyk, Izabela; Jastrzebski, Kamil; Miaczynska, Marta; Ginalski, Krzysztof; Bomsztyk, Karol; Ostrowski, JerzyAcademic press:Nucleic Acids Research (rok: 2016, ), Wydawca: Oxford JournalsStatus:Accepted for publicationDOI:10.1093/nar/gkw763 - link to the publication
- jChIP: a graphical environment for exploratory ChIP-Seq data analysisAuthors:Krzysztof Chojnowski, Krzysztof Goryca, Tymon Rubel, Michal MikulaAcademic press:BMC Research Notes (rok: 2014, tom: Volume 7, strony: 676), Wydawca: BMCStatus:PublishedDOI:10.1186/1756-0500-7-676 - link to the publication